About

The material available on these pages is produced and maintained for a course on how to make your data analyses reproducible. In particular, it covers:

• Data management
• Conda
• Snakemake
• Git
• Jupyter
• R Markdown
• Docker

Material

Slides from lectures covering the topics above are available on Figshare as pptx or pdf. If you're looking for slides/tutorials from a particular instance of the course, select the appropriate Read the Docs tag in the bottom of the panel to the left.

This documentation and all the resources used in the course are available as a Bitbucket repo.

The authors

Leif Wigge and Rasmus Ågren
SciLifeLab, National Bioinformatics Infrastructure Sweden (NBIS), Bioinformatics Long-term Support

License

MIT (see LICENCE.txt in the Bitbucket repo).